GADIOLI, DAVIDE
GADIOLI, DAVIDE
DIPARTIMENTO DI ELETTRONICA, INFORMAZIONE E BIOINGEGNERIA
A Review on Parallel Virtual Screening Softwares for High-Performance Computers
2022-01-01 Murugan, Natarajan Arul; Podobas, Artur; Gadioli, Davide; Vitali, Emanuele; Palermo, Gianluca; Markidis, Stefano
Accelerating a Geometric Approach to Molecular Docking with OpenACC
2018-01-01 Vitali, Emanuele; Gadioli, Davide; Palermo, Gianluca; Beccari, Andrea; Silvano, Cristina
Addressing docking pose selection with structure-based deep learning: Recent advances, challenges and opportunities
2024-01-01 Vittorio, Serena; Lunghini, Filippo; Morerio, Pietro; Gadioli, Davide; Orlandini, Sergio; Silva, Paulo; Jan Martinovic, Null; Pedretti, Alessandro; Bonanni, Domenico; Del Bue, Alessio; Palermo, Gianluca; Vistoli, Giulio; Beccari, Andrea R.
An Efficient Monte Carlo-based Probabilistic Time-Dependent Routing Calculation Targeting a Server-Side Car Navigation System
2019-01-01 Vitali, E.; Gadioli, D.; Palermo, G.; Golasowski, M.; Bispo, J.; Pinto, P.; Martinovic, J.; Slaninova, K.; Cardoso, J.; Silvano, C.
An extreme-scale virtual screening platform for drug discovery
2022-01-01 Gadioli, Davide; Vitali, Emanuele; Ficarelli, Federico; Latini, Chiara; Manelfi, Candida; Talarico, Carmine; Silvano, Cristina; Beccari, Andrea. R.; Palermo, Gianluca
An Hybrid Approach to accelerate a Molecular Docking Application for Virtual Screening in Heterogeneous Nodes
2019-01-01 Vitali, E.; Gadioli, D.; Beccari, A.; Cavazzonio, C.; Silvano, C.; Palermo, G.
ANTAREX: A DSL-based Approach to Adaptively Optimizing and Enforcing Extra-Functional Properties in High Performance Computing
2018-01-01 Silvano, C; Agosta, G; Bartolini, A; Beccari, Ar; Benini, L; Besnard, L; Bispo, J; Cmar, R; Cardoso, Jmp; Cavazzoni, C; Cherubin, S; Gadioli, D; Golasowski, M; Lasri, I; Martinovic, J; Palermo, G; Pinto, P; Rohou, E; Sanna, N; Slaninova, K; Vitali, E
Application autotuning to support runtime adaptivity in multicore architectures
2015-01-01 Gadioli, Davide; Palermo, Gianluca; Silvano, Cristina
Autotuning and adaptivity in energy efficient HPC systems: The ANTAREX toolbox
2018-01-01 Silvano, Cristina; Palermo, Gianluca; Agosta, Giovanni; Ashouri, Amir H.; Gadioli, Davide; Cherubin, Stefano; Vitali, Emanuele; Benini, Luca; Bartolini, Andrea; Cesarini, Daniele; Cardoso, Joao; Bispo, Joao; Pinto, Pedro; Nobre, Riccardo; Rohou, Erven; Besnard, Loïc; Lasri, Imane; Sanna, Nico; Cavazzoni, Carlo; Cmar, Radim; Martinovič, Jan; Slaninová, Kateřina; Golasowski, Martin; Beccari, Andrea R.; Manelfi, Candida
CONTREX: Design of embedded mixed-criticality CONTRol systems under consideration of EXtra-functional properties
2017-01-01 Grüttner, Kim; Görgen, Ralph; Schreiner, Sören; Herrera, Fernando; Peñil, Pablo; Medina, Julio; Villar, Eugenio; Palermo, Gianluca; Fornaciari, William; Brandolese, Carlo; Gadioli, Davide; Vitali, Emanuele; Zoni, Davide; Bocchio, Sara; Ceva, Luca; Azzoni, Paolo; Poncino, Massimo; Vinco, Sara; Macii, Enrico; Cusenza, Salvatore; Favaro, John; Valencia, Raúl; Sander, Ingo; Rosvall, Kathrin; Khalilzad, Nima; Quaglia, Davide
CONTREX: Design of Embedded Mixed-Criticality CONTRol Systems under Consideration of EXtra-Functional Properties
2016-01-01 Gorgen, Ralph; Gruttner, Kim; Herrera, Fernando; Penil, Pablo; Medina, Julio; Villar, Eugenio; Palermo, Gianluca; Fornaciari, William; Brandolese, Carlo; Gadioli, Davide; Bocchio, Sara; Ceva, Luca; Azzoni, Paolo; Poncino, Massimo; Vinco, Sara; Macii, Enrico; Cusenza, Salvatore; Favaro, John; Valencia, Raul; Sander, Ingo; Rosvall, Kathrin; Quaglia, Davide
Design space pruning and computational workload splitting for autotuning OpenCL applications
2018-01-01 Erdem, Ahmet; Gadioli, Davide; Palermo, Gianluca; Silvano, Cristina
Domain-Specific Energy Modeling for Drug Discovery and Magnetohydrodynamics Applications
2023-01-01 Carpentieri, Lorenzo; D'Antonio, Marco; Fan, Kaijie; Crisci, Luigi; Cosenza, Biagio; Ficarelli, Federico; Cesarini, Daniele; Accordi, Gianmarco; Gadioli, Davide; Palermo, Gianluca; Thoman, Peter; Salzmann, Philip; Gschwandtner, Philipp; Wippler, Markus; Marchetti, Filippo; Gregori, Daniele; Beccari, Andrea Rosario
DSL and Autotuning Tools for Code Optimisation on HPC Inspired by Navigation Use Case
2016-01-01 Martinovic, Jan; Slaninova, Katerina; Golasowski, Martin; Cmar, Radim; Cardoso, Joao M. P.; Bispo, Joao; Palermo, Gianluca; Gadioli, Davide; Silvano, Cristina
Dynamic Application Autotuning for Self-aware Approximate Computing
2020-01-01 Gadioli, D.
Enabling performance portability on the LiGen drug discovery pipeline
2024-01-01 Crisci, Luigi; Carpentieri, Lorenzo; Cosenza, Biagio; Accordi, Gianmarco; Gadioli, Davide; Vitali, Emanuele; Palermo, Gianluca; Beccari, Andrea Rosario
Evaluating orthogonality between application auto-tuning and run-time resource management for adaptive OpenCL applications
2014-01-01 Paone, Edoardo; Gadioli, Davide; Palermo, Gianluca; Zaccaria, Vittorio; Silvano, Cristina
Exploiting OpenMP and OpenACC to accelerate a geometric approach to molecular docking in heterogeneous HPC nodes
2019-01-01 Vitali, E.; Gadioli, D.; Palermo, G.; Beccari, A.; Cavazzoni, C.; Silvano, C.
EXSCALATE: An Extreme-Scale Virtual Screening Platform for Drug Discovery Targeting Polypharmacology to Fight SARS-CoV-2
2023-01-01 Gadioli, D.; Vitali, E.; Ficarelli, F.; Latini, C.; Manelfi, C.; Talarico, C.; Silvano, C.; Cavazzoni, C.; Palermo, G.; Beccari, A. R.
GPU-optimized approaches to molecular docking-based virtual screening in drug discovery: A comparative analysis
2024-01-01 Vitali, Emanuele; Ficarelli, Federico; Bisson, Mauro; Gadioli, Davide; Accordi, Gianmarco; Fatica, Massimiliano; Beccari, Andrea R.; Palermo, Gianluca