Functional connectivity mapping provides information about correlated brain areas, useful for many applications such as on mental disorders. This work aims to improve this mapping by using deep metric learning considering the directionality of information flow and time-domain features. To deal with the computational cost of a complete pairwise combination network, we trained a network able to recognize similar signals and, after training, feed it with all combinations of signals from each brain area. The labels of similarity or dissimilarity are determined by agglomerative clustering using the Jensen-Shannon Distance as a metric. To validate our approach we employed a resting-state eye-open functional MRI dataset from ADHD and healthy subjects. Once registered, the signals are filtered and averaged by area with a functional trimmed mean. After obtaining the connectivity maps from each subject, we perform a feature importance selection using logistic regression. The ten most promising areas were extracted, such as the frontal cortex and the limbic system. These results are in complete agreement with previous literature. It is well known those areas are mainly involved in attention and impulsivity.

BEBOP: Bidirectional dEep Brain cOnnectivity maPping

Letizia Clementi;Marco Domenico Santambrogio
2022-01-01

Abstract

Functional connectivity mapping provides information about correlated brain areas, useful for many applications such as on mental disorders. This work aims to improve this mapping by using deep metric learning considering the directionality of information flow and time-domain features. To deal with the computational cost of a complete pairwise combination network, we trained a network able to recognize similar signals and, after training, feed it with all combinations of signals from each brain area. The labels of similarity or dissimilarity are determined by agglomerative clustering using the Jensen-Shannon Distance as a metric. To validate our approach we employed a resting-state eye-open functional MRI dataset from ADHD and healthy subjects. Once registered, the signals are filtered and averaged by area with a functional trimmed mean. After obtaining the connectivity maps from each subject, we perform a feature importance selection using logistic regression. The ten most promising areas were extracted, such as the frontal cortex and the limbic system. These results are in complete agreement with previous literature. It is well known those areas are mainly involved in attention and impulsivity.
2022
2022 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI)
978-1-6654-8791-7
Deep Metric Learning
Deep Learning
ADHD
functional MRI
Functional Data Analysis
File in questo prodotto:
File Dimensione Formato  
BHI22_BEBOP.pdf

accesso aperto

: Pre-Print (o Pre-Refereeing)
Dimensione 776.55 kB
Formato Adobe PDF
776.55 kB Adobe PDF Visualizza/Apri

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11311/1231405
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 0
  • ???jsp.display-item.citation.isi??? 0
social impact