Thanks to the huge amount of sequenced data that is becoming available, building scalable solutions for supporting query processing and data analysis over genomics datasets is increasingly important. This paper presents GDMS, a scalable Genomic Data Management System for querying region-based genomic datasets; the focus of the paper is on the deployment of the system on a cluster hosted by CINECA.

Scalable genomic data management system on the cloud

Kaitoua, Abdulrahman;GULINO, ANDREA;Masseroli, Marco;Pinoli, Pietro;Ceri, Stefano
2017-01-01

Abstract

Thanks to the huge amount of sequenced data that is becoming available, building scalable solutions for supporting query processing and data analysis over genomics datasets is increasingly important. This paper presents GDMS, a scalable Genomic Data Management System for querying region-based genomic datasets; the focus of the paper is on the deployment of the system on a cluster hosted by CINECA.
2017
Proceedings - 2017 International Conference on High Performance Computing and Simulation, HPCS 2017
9781538632505
Big data processing; Data management on the cloud; Genomic computing; System architecture; Computer Science Applications1707 Computer Vision and Pattern Recognition; Information Systems and Management; Modeling and Simulation; Computer Networks and Communications; Computer Science (miscellaneous)
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11311/1039967
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